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Anna-Sophie Fiston-Lavier

Associate professor Equipe Evolution, Vecteurs, Adaptation et Symbioses
Tél. +33 (0)4 67 14 47 15
Localisation Bâtiment 22, 1er étage
Mots clés Répétitions d’ADN insectes Evolution et Dynamique des génomes Adaptation Next-generation sequencing

Site: anna.fiston-lavier.com

1. McCoy R.C., Taylor R.W., Blauwkamp T.A., Kelley J.L., Kertesz M, Pushkarev D., Petrov D.A. and Fiston-Lavier AS. Illumina TruSeqTM synthetic long-reads empower de novo assembly and resolve complex, highly repetitive transposable elements.bioRxiv:doi: 10.1101/001834. PLoS One. 2014 Sept. doi:10.1371/ journal.pone.0106689

2. Kelley J.L., Fiston-Lavier AS, Peyton J.T., Teets N.M., Yee M.C., Johnston J.S., Bustamante C.D., Lee R.E. Jr. and  Denlinger D.L.. Insights into evolution of the small genome of the Antarctic midge. Nature Comm. 2014 July. doi:10.1038/ncomms5611.

3. Field B, Fiston-Lavier AS, Kemen A, Geisler K, Quesneville H and Osbourn A. Formation of plant metabolic gene clusters within dynamic chromosomal regions. PNAS 2011 August. doi:10.1073/pnas.110973108. Cited in F1000.

4. Fiston-Lavier AS, Carrigan M, Petrov DA and Gonzalez J. T-LEX: A program for fast and accurate assessment of transposable element presence using next-generation sequencing data. Nuc. Acids. Res. 2011 doi:10.1093/nar/gkq1291.

5. Fiston-Lavier AS, Singh ND, Lipatov M, and Petrov DA. Drosophila melanogaster Recombination Rate Calculator. Gene 2009 doi:10.1016/j.gene.2010.04.015.

6. Fiston-Lavier AS, Anxolabehere D, Quesneville H. A model of segmental duplication formation in Drosophila melanogaster. Genome Research 2007 Oct; 17(10):1458-70. Epub 2007 Aug 28. Cited in F1000.

7. Andrieu O, Fiston AS, Anxolabehere D, Quesneville H. Detection of transposable elements by their compositional bias. BMC Bioinformatics 2004 Jul 13;5:94.