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Frédéric DELSUC

Directeur de recherche CNRS Equipe Phylogénie et Evolution Moleculaire
Tél. +33 (0)4 6714 39 64
Localisation bâtiment 22, RDC
Mots clés Phylogénie Moléculaire Phylogénomique Systématique et évolution des mammifères Evolution moléculaire et adaptation Evolution et développement des tuniciers

Site personnel : http://fdelsuc.wixsite.com/homepage

Je m’intéresse aux aspects méthodologiques de l’inférence phylogénétique et à son application pour reconstruire l’histoire évolutive des mammifères et des tuniciers à partir de données génomiques. Le but ultime de mes recherches vise à comprendre les adaptations génomiques qui sous-tendent les phénomènes de convergence morphologique.

Selected references (full list available at http://fdelsuc.perso.neuf.fr/fd_pubs.html):

Chiari Y., Cahais V., Galtier N. & Delsuc F. (2012). Phylogenomic analyses support the position of turtles as the sister-group of birds and crocodiles (Archosauria). BMC Biology 10: 65.

Laguette N.*, Rahm N.*, Sobhian B., Chable-Bessia C., Münch J., Snoeck J., Sauter D., Switzer W.M., Heneine W., Kirchhoff F., Delsuc F., Telenti A. & Benkirane M. (2012). Evolutionary and functional analyses of the interaction between the myeloid restriction factor SAMHD1 and the lentiviral Vpx protein. Cell Host & Microbe 11: 211-217.

Lartillot N. & Delsuc F. (2012). Joint reconstruction of divergence times and life history evolution in placental mammals using a phylogenetic covariance model. Evolution 66: 1773-1787.

Delsuc F., Superina M., Tilak M.-K., Douzery E.J.P. & Hassanin A. (2012). Molecular phylogenetics unveils the ancient evolutionary origins of the enigmatic fairy armadillos. Molecular Phylogenetics and Evolution 62: 673-680.

Ranwez V., Harispe S., Delsuc F. & Douzery E.J.P. (2011). MACSE: Multiple Alignment of Coding Sequences accounting for frameshifts and stop codons. PLoS ONE 6: e22594.

Tsagkogeorga G., Turon X., Galtier N., Douzery E.J.P. & Delsuc F. (2010). Accelerated evolutionary rate of housekeeping genes in tunicates. Journal of Molecular Evolution 71: 153-167.

Tsagkogeorga G., Turon X., Hopcroft R.R., Tilak M.-K., Feldstein T., Shenkar N., Loya Y., Huchon D., Douzery E.J.P. & Delsuc F. (2009). An updated 18S rRNA phylogeny of tunicates based on mixture and secondary structure models. BMC Evolutionary Biology 9: 187.

Delsuc F., Tsagkogeorga G., Lartillot N. & Philippe H. (2008). Additional molecular support for the new chordate phylogeny. Genesis 46: 592-604.

Möller-Krull M.*, Delsuc F.*, Churakov G., Marker C., Superina M., Brosius J., Douzery E.J.P. & Schmitz J. (2007). Retroposed elements and their flanking regions resolve the evolutionary history of xenarthran mammals (armadillos, anteaters and sloths). Molecular Biology and Evolution 24: 2573-2582.

Ranwez V., Delsuc F., Ranwez S., Belkhir K., Tilak M.-K. & Douzery E.J.P. (2007). OrthoMaM: a database of orthologous genomic markers for placental mammal phylogenetics. BMC Evolutionary Biology 7: 241.

Delsuc F., Brinkmann H., Chourrout D. & Philippe H. (2006). Tunicates and not cephalochordates are the closest living relatives of vertebrates. Nature 439: 965-968.

Delsuc F., Brinkmann H. & Philippe H. (2005). Phylogenomics and the reconstruction of the tree of life. Nature Reviews Genetics 6: 361-375.

Delsuc F., Vizcaíno S.F. & Douzery E.J.P. (2004). Influence of Tertiary paleoenvironnemental changes on the diversification of South American mammals: A relaxed molecular clock study within xenarthrans. BMC Evolutionary Biology 4: 11.

Phillips M.J., Delsuc F. & Penny D. (2004). Genome-scale phylogeny and the detection of systematic biases. Molecular Biology and Evolution 21: 1455–1458.

Delsuc F., Stanhope M.J. & Douzery E.J.P. (2003). Molecular systematics of armadillos (Xenarthra, Dasypodidae): Contribution of maximum likelihood and Bayesian analyses of mitochondrial and nuclear genes. Molecular Phylogenetics and Evolution 28: 261-275.

Douady C.J., Delsuc F., Boucher Y., Doolittle W.F. & Douzery E.J.P. (2003). Comparison of Bayesian and maximum likelihood bootstrap measures of phylogenetic reliability. Molecular Biology and Evolution 20: 248-254.

Delsuc F., Scally M., Madsen O., Stanhope M.J., de Jong W.W., Catzeflis F.M., Springer M.S. & Douzery E.J.P. (2002). Molecular phylogeny of living xenarthrans and the impact of character and taxon sampling on the placental tree rooting. Molecular Biology and Evolution 19: 1656-1671.

Delsuc F., Catzeflis F.M., Stanhope M.J. & Douzery E.J.P. (2001). The evolution of armadillos, anteaters, and sloths depicted by nuclear and mitochondrial phylogenies: Implications for the status of the enigmatic fossil EurotamanduaProceedings of the Royal Society of London, Biological Sciences 268: 1605-1615.